| P.K. YONGE DEVELOPMENTAL RESEARCH SCHOOL | UF LAB SCH | KG–12 | 1,261 | 55 | A |
| MEADOWBROOK ELEMENTARY SCHOOL | ALACHUA | PK–05 | 800 | 48 | A |
| ALACHUA VIRTUAL INSTRUCTION PROGRAM (DISTRICT PROVIDED) | ALACHUA | PK–05 | 371 | 40 | A |
| WILLIAM S. TALBOT ELEM SCHOOL | ALACHUA | PK–05 | 631 | 39 | A |
| CAROLYN BEATRICE PARKER ELEMENTARY | ALACHUA | KG–05 | 527 | 38 | A |
| JOSEPH WILLIAMS ELEMENTARY SCHOOL | ALACHUA | KG–05 | 479 | 38 | A |
| LITTLEWOOD ELEMENTARY SCHOOL | ALACHUA | PK–05 | 649 | 37 | A |
| GLEN SPRINGS ELEMENTARY SCHOOL | ALACHUA | KG–05 | 391 | 36 | A |
| ALACHUA ESCHOOL (VIRTUAL FRANCHISE) | ALACHUA | 06–12 | 430 | 35 | A |
| LAWTON M. CHILES ELEMENTARY SCHOOL | ALACHUA | PK–05 | 718 | 35 | A |
| CARING & SHARING LEARNING SCHOOL | ALACHUA | PK–06 | 196 | 34 | A |
| THE ONE ROOM SCHOOL HOUSE PROJECT | ALACHUA | KG–06 | 188 | 34 | A |
| PROFESSIONAL ACADEMY MAGNET AT LOFTEN HIGH SCHOOL | ALACHUA | PK–12 | 263 | 34 | A |
| NORTH CENTRAL FLORIDA PUBLIC CHARTER SCHOOL | ALACHUA | 08–12 | 182 | 34 | A |
| BOULWARE SPRINGS CHARTER | ALACHUA | KG–05 | 157 | 32 | A |
| STEPHEN FOSTER ELEMENTARY SCHOOL | ALACHUA | KG–05 | 453 | 32 | A |
| HIDDEN OAK ELEMENTARY SCHOOL | ALACHUA | PK–05 | 738 | 31 | A |
| LAKE FOREST ELEMENTARY SCHOOL | ALACHUA | PK–05 | 327 | 31 | A |
| RESILIENCE CHARTER SCHOOL INC | ALACHUA | 06–08 | 114 | 31 | A |
| THE EINSTEIN SCHOOL INC. | ALACHUA | 02–08 | 100 | 30 | A |
| SIATECH AT GAINESVILLE | ALACHUA | 09–12 | 88 | 29 | A |
| EXPRESSIONS LEARNING ARTS ACADEMY | ALACHUA | KG–05 | 83 | 29 | A |
| F. W. BUCHHOLZ HIGH SCHOOL | ALACHUA | 09–12 | 2,472 | 28 | A |
| PACE | ALACHUA | 06–12 | 48 | 28 | A |
| MARJORIE KINNAN RAWLINGS ELEMENTARY SCHOOL | ALACHUA | PK–05 | 393 | 27 | A |
| ALACHUA REGIONAL JUVENILE DETENTION CENTER | ALACHUA | 05–12 | 35 | 27 | A |
| W. A. METCALFE ELEMENTARY SCHOOL | ALACHUA | PK–05 | 243 | 24 | A |
| KIMBALL WILES ELEMENTARY SCHOOL | ALACHUA | PK–05 | 844 | 21 | A |
| C. W. NORTON ELEMENTARY SCHOOL | ALACHUA | PK–05 | 551 | 19 | A |
| MYRA TERWILLIGER ELEMENTARY SCHOOL | ALACHUA | PK–05 | 496 | 15 | A |
| HOWARD W. BISHOP MIDDLE SCHOOL | ALACHUA | 06–08 | 704 | 14 | A |
| KANAPAHA MIDDLE SCHOOL | ALACHUA | 06–08 | 1,122 | 14 | A |
| GAINESVILLE HIGH SCHOOL | ALACHUA | 07–12 | 1,873 | 13 | A |
| EASTSIDE HIGH SCHOOL | ALACHUA | 09–12 | 1,175 | 11 | A |
| IDYLWILD ELEMENTARY SCHOOL | ALACHUA | PK–05 | 661 | 10 | A |
| ABRAHAM LINCOLN MIDDLE SCHOOL | ALACHUA | 06–09 | 735 | 8 | A |
| FORT CLARKE MIDDLE SCHOOL | ALACHUA | 06–12 | 942 | 5 | A |
| SIDNEY LANIER CENTER | ALACHUA | KG–12 | 168 | 5 | A |
| WESTWOOD MIDDLE SCHOOL | ALACHUA | 06–08 | 851 | 1 | A |
| A.QUINN JONES CENTER | ALACHUA | 06–12 | 65 | 1 | A |
| ALACHUA ACADEMY | ALACHUA | 06–12 | 10 | — insufficient data | A |
| ALACHUA COUNTY JAIL | ALACHUA | 06–12 | | — insufficient data | |
| ALACHUA VIRTUAL INSTRUCTION PROGRAM | ALACHUA | KG–12 | | — insufficient data | |
| AMIKIDS | ALACHUA | 06–12 | 14 | — insufficient data | A |
| EARLY LEARNING ACADEMY AT DUVAL | ALACHUA | PK–KG | | — insufficient data | |
| FEARNSIDE FAMILY SERVICES CENTER | ALACHUA | PK–PK | | — insufficient data | |
| HOSPITAL HOMEBOUND | ALACHUA | KG–12 | | — insufficient data | |
| P. K. YONGE VIRTUAL FRANCHISE | UF LAB SCH | 06–12 | | — insufficient data | |
| SANTA FE COLLEGE HIGH SCHOOL DUAL ENROLLMENT | ALACHUA | 11–12 | | — insufficient data | |
| WILES HEAD START | ALACHUA | PK–PK | | — insufficient data | |